rs45730220 SNP Detail

Summary

• ID
  rs45730220
• Variation Type
  SNP
• Alleles
  T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr13:114952405 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        AAGAG CAGAAGAAAT GTGTGCACCA
  T
  GCCGCCTGCT TGCTTGCTTC TGGCT                                      
  
  T = T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	DBA/2J
ss145319399	ENSMUSSNP4083261	ENSEMBL	ENSEMBL_Sanger	f	SNP	T
SNP Consensus Information
SNP					Consensus Type	DBA/2J
rs45730220					SNP	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr13:114952405 () rs orientation: forward

Symbol	Name	Function Class
Cpgi6123	CpG island 6123	1872 bp proximal
Gm34790	predicted gene, 34790	within coordinates
Rr280966	regulatory region 280966	1595 bp proximal
Rr389127	regulatory region 389127	1628 bp downstream