rs45732869 SNP Detail

Summary

• ID
  rs45732869
• Variation Type
  SNP
• Alleles
  A

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr11:6020132 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ACTGAGCCAG AAAAGCGCCC
  ACTGGGTTTT GTTGGTGGCT CCTCTGTAGT AGACTCTGTC TGGTATCTGA GTTCTCTTAC
  AGATGTGAGC CCACCACTAT GGTCAACTGC AACATGGTAG AGCTCTCTAG TCAGCTCCGA
  GCAACGTCAC AGGCCTGGCT CGGGTTCAAC CTGAGGACAC CAGGCAGGAA CCTCGGACTT
  A
  CTCCTGGTCG TCAATCACCA TGTCCAGAAC AGAGCAGACC ATAACCCTGG GCAGGGGGAG
  GGAGGTGAGA GTAGCTGCAC TCCTAGGCTA CAGCTTGGTG TCACTTGCTT AGTGTCACTC
  CTCCGGTGCC CTGCTTAGGC TTCTGTCTGG TTGAGGTTCT CTGGAACACT CCTGGTACTC
  CCTGAACCCT TGGTGAGTTG                                            
  
  A = A
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J
ss131641308	ENSMUSSNP1713457	ENSEMBL	ENSEMBL_Sanger	f	SNP	A
SNP Consensus Information
SNP					Consensus Type	A/J
rs45732869					SNP	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr11:6020132 () rs orientation: forward

Symbol	Name	Function Class
Cpgi2552	CpG island 2552	1672 bp distal
Gm74282	predicted gene, 74282	1067 bp upstream
Rr442232	regulatory region 442232	1603 bp distal
Rr442233	regulatory region 442233	1102 bp distal
Rr442234	regulatory region 442234	980 bp distal