rs45733821 SNP Detail

Summary

• ID
  rs45733821
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:110445432 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TTGTAGTAAT ATGTAAAGCT
  CATGATATAT GCTTAAGAGT GCTATAGCTG CATCTTGTGG TATATGAGGA ACCACCACAT
  TGATTTCCAT AGTGGCTGTT CAAATTTGCA TACATACCAG CGATGGATAC GTGTTTCTGT
  TCTACACATC CTTGTCAGAA TGAGCAGTCA TTAATTTTAT TGATCTTGGC CATTCTGACT
  R
  GTGTAAGGTG AGATCTCAAA GTAGTTTTGA TTTGCATTTC CCTGATGACT AAAGATGTTG
  AACATTTCAT TACATGTTTC TCAGCCATTT CTGTTTCATC TTTTGAGAAC CTTCTACTTA
  GATCTGTACC TAATTTTAAA TTGTTTTATG TCCAGTTTTT TTTAGTTATT TATATACTTT
  AGATATTTGC CATCTAGTAT                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	LG/J	SM/J
ss147201024	ENSMUSSNP2125799	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	A
ss321257617	CHEV_4_110260840	CHEVERUD	SCREENING_POP	f	SNP			A	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	LG/J	SM/J
rs45733821					SNP	A	A	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:110445432 () rs orientation: forward

Symbol	Name	Function Class
Agbl4	ATP/GTP binding protein-like 4	within coordinates
Rr377006	regulatory region 377006	152 bp downstream
Tssr38375	transcription start site region 38375	1179 bp upstream