rs45735165 SNP Detail

Summary

• ID
  rs45735165
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr12:83984519 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CACTCGTTCA GGAGATGAGA
  GCATAGCGCT CACCCACCCC TCGTTCCTCG GGGCTGAGAC AGCGTCTACT TGGCTTGCTT
  GGTACACAAC TAGAAACCAT GTTTAAGAGT CTCTGACATG TTGTAGGTAA CTGGCAGATG
  GCTGCTGTGA TCGGATTTAG TTGTTGCCTT AAGAGCAGAC AATCAGAAGT TCCCAGGAAC
  S
  GAGGTATATG GACAAACTGA CACCTAGTGG TGCAGTTTTT AAACCATGAG CCAGAAGTAT
  AGTTAATTGC TAGCTTGACA TTTAGTTTGG GGGAGTAAGC AGACAGCAAC AGAACGCCTG
  CTTTTCCATA GGAACAACAT TTAGCATCTC TGGTCAGGGA TTTTCAAACG CGACAGTGTA
  TGGGAATGGC GTGTGAAGAG                                            
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss61663093	NES17611053	PERLEGEN	MM_PANEL2	f	SNP	G	G	G	G	G	G	C	G	G	G	C	G	G	C	G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs45735165					SNP	G	G	G	G	G	G	C	G	G	G	C	G	G	C	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss61663093	NES17611053	PERLEGEN	MM_PANEL	f	SNP	C/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr12:83984519 () rs orientation: forward

Symbol	Name	Function Class
Gm60518	predicted gene, 60518	within coordinates
Rr469522	regulatory region 469522	427 bp distal
Rr469523	regulatory region 469523	14 bp proximal