rs45741967 SNP Detail

Summary

• ID
  rs45741967
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:121426934 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TATGG TCGTTCTTCC CACCTCATTT
  R
  ACCAAATCAA GACCACCCCT CACAG                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J	LG/J	SM/J
ss137068144	ENSMUSSNP6160118	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	A
ss323231656	CHEV_9_121506986	CHEVERUD	SCREENING_POP	f	SNP			A	A
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J	LG/J	SM/J
rs45741967					SNP	G	A	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:121426934 () rs orientation: forward

Symbol	Name	Function Class
Gm57058	predicted gene, 57058	164 bp upstream
Lyzl4	lysozyme-like 4	within coordinates
Lyzl4os	lysozyme-like 4, opposite strand	within coordinates
Rr207963	regulatory region 207963	1668 bp proximal
Tssr87791	transcription start site region 87791	1931 bp upstream
Tssr92055	transcription start site region 92055	653 bp upstream