rs45743174 SNP Detail

Summary

• ID
  rs45743174
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:83403092 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AACTCCAAAT TCATTCTAAA
  ATAATTCTTT TCAAATCTTA TAGGTATTGT TTGTTTTCTA CTCTTTTAAT ATTTAATAAA
  AAATACCAAC TGTGTAGCTA TGTATGTTCC CACAGCATTG TGAACCTTGT GGGTTAGCCC
  AACAGATATT ACTGATGTTT TGCCATTATT CCTTTTATGA AGCCTGCCAT CCTTGCCACA
  S
  CAGAGTAACT ATCATGCAGG CAGGCATCAC ATCGACACAA GCATATTTTC TCTATACACT
  CGCCATTCAG CAGAGGGTAG CTTCATGGTT TATAGAATTT TCAATTGGTA AAAGTAATTG
  TTCAGTGTTT CAGGCTGTGG TCTACTGGAG CAAAGGTACA AAAAGGAGTT ATATGGCTTC
  ATAAAACACA TAGTTTATAA                                            
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J	MSM/Ms
ss144833283	ENSMUSSNP5397875	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	C	C	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J	MSM/Ms
rs45743174					SNP	C	C	C	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:83403092 () rs orientation: forward

Symbol	Name	Function Class
Gm37989	predicted gene, 37989	1225 bp downstream
Gm69621	predicted gene, 69621	889 bp downstream