rs45743640 SNP Detail

Summary

• ID
  rs45743640
• Variation Type
  SNP
• Alleles
  G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr5:144177416 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ACCACGCCCG GCATCTTAGC
  ATCATTTCTA TTGCTGTCAT AGACACCATG ATTAAAACCA CTTGGGGAGA ATGGGGTTTA
  CTTCATCTTA GAGCTCTCAG ATCACAGTCT GTCACTGAGG GAAGTCAGGG CAGGAACCTG
  GAGGCAGGAA CTGAGAAGCA GAGGCCAAGG AGGAGGCCTG CTGTCTGACT TGCTCCTTTT
  G
  GCTTGCTCAG CCTGCTTTCT TTTTGTTTTT GTTTCTTTGT TTGTTTGTTT TTTCGAGACA
  GGGTTTCTCT GTGTAGCCCT GGCTGTCCTG GAACTCACTT TGTAGACCAG GCTGGCCTCG
  AACTCAGAAA TCCGCCTGCC TCTGCCTCCC GCGTGCTGGG ATTAAAGGCG TGCACCACCA
  CACCCAGCTC AGCCTGCTTT                                            
  
  G = G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321709564	CHEV_5_145001475	CHEVERUD	SCREENING_POP	f	SNP	G	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs45743640					SNP	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr5:144177416 () rs orientation: forward

Symbol	Name	Function Class
2900089D17Rik	RIKEN cDNA 2900089D17 gene	1175 bp downstream