rs45745875 SNP Detail

Summary

• ID
  rs45745875
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr12:61625133 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        AAGTA CTATGGCATG CACATGCATG
  Y
  TCAGAGGACA ATGTTCCCAG ACTCA                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	LG/J	SM/J
ss137814852	ENSMUSSNP1051590	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	C
ss324064047	CHEV_12_62679334	CHEVERUD	SCREENING_POP	f	SNP			T	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	LG/J	SM/J
rs45745875					SNP	T	C	T	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr12:61625133 () rs orientation: forward

Symbol	Name	Function Class
Gm30738	predicted gene, 30738	1327 bp upstream
Lrfn5	leucine rich repeat and fibronectin type III domain containing 5	within coordinates