rs45751035 SNP Detail

Summary

• ID
  rs45751035
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr12:79038515 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AAGACATCAA GTGAGGGGGA
  GTCCTAGACT GACCTGAGCT CAATCCCAGA GTAGGTAGGA CACATGTGCC TTTAGTAGTA
  GTAGTAGTAG TAGTAGTAGT AGTAGTAGTA GTAGTATTGG TACTAGTAGT AGTAGAGATG
  AAACCCAGGG CTTCTCACAC TCTAAGTACT TACCTCTATA TCCTCAATAC ATGTGTATTG
  Y
  TTGAATCTTC TTGACAGAGA AGACAAGCAG ACATATACGA TTAAGTGTAA CTTATGTAAG
  GTTATACAAA CACTGTGGTA CTGTAAGCTA GACCTAAAGC CCAAGCAGCC AGTACCTGGT
  CCTTGGTTCT TCCTCACCAG GAGAGAGAAT TGGAAGATAG CTATCAACAC CATGGTAGGT
  GCTCCAGGTT CTCAGAGGTT                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	LG/J	MOLF/EiJ	NOD/ShiLtJ	PWD/PhJ	SM/J
ss61653842	NES17604448	PERLEGEN	MM_PANEL2	f	SNP	C	T	C	C	C	C	C	C	T		C	C	C
ss324107621	CHEV_12_80092728	CHEVERUD	SCREENING_POP	f	SNP										T				T
SNP Consensus Information
SNP					Consensus Type	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	LG/J	MOLF/EiJ	NOD/ShiLtJ	PWD/PhJ	SM/J
rs45751035					SNP	C	T	C	C	C	C	C	C	T	T	C	C	C	T

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss61653842	NES17604448	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr12:79038515 () rs orientation: forward

Symbol	Name	Function Class
D12Mit4	DNA segment, Chr 12, Massachusetts Institute of Technology 4	1649 bp proximal
Tmem229b	transmembrane protein 229B	within coordinates