rs45754656 SNP Detail

Summary

• ID
  rs45754656
• Variation Type
  SNP
• Alleles
  T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  132
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr2:121053964 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                      G AGCCCAGGAC AGTGTATCTA GAACCATCTC CTTTGGCCCT
  TTGTTTCCCC CACCTTGGTC ATCAACAGAA AAAGAAAAGG CTTGAATGGT GGGAAAACAA
  T
  TACTTAGATT CTAACAGTAA GAACTTGAAT GGCAGGAAAA CTAGTAGGTA TTCTAACAGT
  AAGAATAACA AACGTTTGTT ATATTTAAAA TTACCGAGGA A                    
  
  T = T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss147381990	ENSMUSSNP7109919	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	T	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs45754656					SNP	T	T	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:121053964 () rs orientation: forward

Symbol	Name	Transcript	Protein	Function Class	Allele	Residue	Codon Position	AA Position
Rr373765	regulatory region 373765			1538 bp downstream
Rr563789	regulatory region 563789			114 bp distal
Rr563790	regulatory region 563790			243 bp distal
Trp53bp1	transformation related protein 53 binding protein 1			Intron
				Noncoding-Transcript-Variant