rs45756794 SNP Detail

Summary

• ID
  rs45756794
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr8:88198488 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GGGGT AGACCGGAGT CCGCCCGAGC
  R
  TGGCCTCGCG CTTCTGCAGA GTCCC                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss145439821	ENSMUSSNP2249325	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	A	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs45756794					SNP	G	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr8:88198488 () rs orientation: forward

Symbol	Name	Function Class
Cbln1	cerebellin 1 precursor protein	within coordinates
Cbln1os	cerebellin 1 precursor protein opposite strand	952 bp upstream
Cpgi20771	CpG island 20771	592 bp distal
Cpgi20772	CpG island 20772	within coordinates
Rr666962	regulatory region 666962	516 bp proximal
Rr666963	regulatory region 666963	641 bp proximal
Rr666964	regulatory region 666964	1094 bp proximal
Rr666965	regulatory region 666965	1180 bp proximal
Rr666966	regulatory region 666966	1468 bp proximal
Tssr2634	transcription start site region 2634	666 bp downstream
Tssr78595	transcription start site region 78595	911 bp upstream
Tssr78596	transcription start site region 78596	923 bp upstream
Tssr78597	transcription start site region 78597	945 bp upstream
Tssr78598	transcription start site region 78598	978 bp upstream
Tssr78599	transcription start site region 78599	1006 bp upstream
Tssr78600	transcription start site region 78600	1029 bp upstream
Tssr78601	transcription start site region 78601	1036 bp upstream
Tssr78602	transcription start site region 78602	1293 bp upstream
Tssr78603	transcription start site region 78603	1390 bp upstream
Tssr78604	transcription start site region 78604	1519 bp upstream
Tssr78605	transcription start site region 78605	1547 bp upstream
Tssr82308	transcription start site region 82308	1938 bp upstream
Tssr82309	transcription start site region 82309	1751 bp upstream
Tssr82310	transcription start site region 82310	1558 bp upstream
Tssr82311	transcription start site region 82311	1399 bp upstream
Tssr82312	transcription start site region 82312	1209 bp upstream
Tssr82313	transcription start site region 82313	1183 bp upstream
Tssr82314	transcription start site region 82314	261 bp downstream
Tssr82315	transcription start site region 82315	301 bp downstream
Tssr82316	transcription start site region 82316	340 bp downstream
Tssr82317	transcription start site region 82317	505 bp downstream
Tssr82318	transcription start site region 82318	683 bp downstream
Tssr82319	transcription start site region 82319	716 bp downstream
Tssr82320	transcription start site region 82320	743 bp downstream
Tssr82321	transcription start site region 82321	755 bp downstream