rs45760395 SNP Detail

Summary

• ID
  rs45760395
• Variation Type
  SNP
• Alleles
  G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr2:166490436 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TCTTTGTCTG TCACCTGGAC
  TGACACCCAC AGTAACCCCA AATAAACAGG GTCTCCATGC AGCGCACAGG CTGGTACACT
  CAGCCAGGAC CCCTTGTCTC CACCTACAAG CCCCAGGTGA CCATGAGTAG TGATGGACTT
  GAATGCTATC ACTTTACTGG TGAGCCTGGT TTACTGGTCC ACCTGGCCCA GGGAGTACAG
  G
  CATCAAGAAA CCCCCCATCT ACCAGGCCCG TATGCCCCCT AACCATGGTG CTCTCAGTCC
  TAGCTCCCCA TGGTCCCCCA GAGTCCCAGA CTGCCTGGAC AATGACACCT CTGCCTCCTG
  AGAGTTCAGC CTCTTCACCC TTCAAGATCC CTTAAGATGC GCAAACCAGT CAATGCTCCA
  CTTAATTCTC CATGCCTCCC                                            
  
  G = G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	DBA/2J
ss148257406	ENSMUSSNP1588907	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	DBA/2J
rs45760395					SNP	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:166490436 () rs orientation: forward

Symbol	Name	Transcript	Protein	Function Class	Allele	Residue	Codon Position	AA Position
Prex1	phosphatidylinositol-3,4,5-trisphosphate-dependent Rac exchange factor 1			Intron
				Noncoding-Transcript-Variant
Rr570326	regulatory region 570326			1637 bp distal
Rr570327	regulatory region 570327			1930 bp proximal