rs45763185 SNP Detail

Summary

• ID
  rs45763185
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr17:48767592 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TGACA GATGCCCCGT CACTGTCTCA
  Y
  AGACAGGGAC TAGTGAGTCC TGTGG                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
ss145717235	ENSMUSSNP5555300	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	T	T
ss325408728	CHEV_17_48599889	CHEVERUD	SCREENING_POP	f	SNP				C	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
rs45763185					SNP	C	T	T	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr17:48767592 () rs orientation: forward

Symbol	Name	Function Class
Rr370279	regulatory region 370279	1547 bp upstream
Rr528301	regulatory region 528301	1843 bp distal
Rr528302	regulatory region 528302	43 bp distal
Rr528303	regulatory region 528303	1111 bp proximal
Tssr145120	transcription start site region 145120	1791 bp upstream
Unc5cl	unc-5 family C-terminal like	within coordinates