rs45764344 SNP Detail

Summary

• ID
  rs45764344
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:25954384 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GGCCAACATT ACATCAATCA
  GAATCCTAAA TACTGCATTT TCTATGAAAC TTGACAGTTC TTCTTACGTC AATATGTGCA
  TTCTGAGGTG TGAATACATG GTAACTACTA CTGTCAAAAA TTTTGGAGAA GGTCTTTTTA
  ATGTATTCTA GGCTGGCATG AACTCCTGGC CTCTAAGGAT TCTCTGATTT CACCTGTCAG
  Y
  AATACCATTT ATTAAAGGTG TTGTCCCATA CCCTAAGATC CAATAATTGG ATCAAAATTA
  TTCATTTTGA CCAGAGAAAT AGTGTGGTAT ATTCTAAAGG AAATTTTGCT GAATCACAGA
  ATGTACTTCT GGAACCTAAC CTATAGAGAC ATTGTTTTAT CGCAAGCTAC AATTGAAATT
  TTGTGAAATT TCTCTTTAAG                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	AKR/J	BALB/cByJ	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss60978849	NES16140104	PERLEGEN	MM_PANEL2	f	SNP	T	T	T	T	C	T	T	T	C	T	T	T	C
SNP Consensus Information
SNP					Consensus Type	A/J	AKR/J	BALB/cByJ	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs45764344					SNP	T	T	T	T	C	T	T	T	C	T	T	T	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss60978849	NES16140104	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:25954384 () rs orientation: forward

Symbol	Name	Function Class
Vmn1r-ps86	vomeronasal 1 receptor, pseudogene 86	121 bp upstream