rs45764467 SNP Detail

Summary

• ID
  rs45764467
• Variation Type
  SNP
• Alleles
  C

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr18:35908284 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        TAAACGTTTT TGTTTGTTTG TTTTCAAAAA GATAAGATTT
  TTCTATGTAG CCCTGGCTAT CTTAGAACTT GATCTGTAGA CAAAACTGAC CTCGAACTCA
  C
  AGAGATCCAC CTGCCTCTGC CTCCAGGTGT TGGGATGGAA GGCATGTGTC ACCACCGCCT
  GGTCCTAGAA CCTTTCTTGA AGTTAAGTAT GGCTTCACT                       
  
  C = C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss146946405	ENSMUSSNP2782294	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	C	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs45764467					SNP	C	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr18:35908284 () rs orientation: forward

Symbol	Name	Function Class
Rr535949	regulatory region 535949	1250 bp proximal
Tssr150562	transcription start site region 150562	1426 bp downstream
Ube2d2a	ubiquitin-conjugating enzyme E2D 2A	within coordinates