rs45765715 SNP Detail

Summary

• ID
  rs45765715
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  132
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr10:123034460 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                      A GCCATAAAAA GCAGTGTCCG TCCACGTACT CTGCTCTGGG
  TTCCTGTTGA GCTCTGGCTG TGACCTTCCC CTAGCGTAAG CCACCCAGAC CCTTTCTTTC
  Y
  TAAGTTGCCT TTGGTCAGAA TGCTTTGTTG CAGCAATAGA AAACAACTAG CACAACCGGT
  GTGTATTGGC GTCATACTTG AGTGAGTCAG TATGTGACTG C                    
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	DBA/2J
ss147657972	ENSMUSSNP5042923	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	DBA/2J
rs45765715					SNP	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr10:123034460 () rs orientation: forward

Symbol	Name	Function Class
Cpgi2311	CpG island 2311	948 bp distal
Gm4129	predicted gene 4129	within coordinates
Gm55025	predicted gene, 55025	1584 bp upstream
Rr224370	regulatory region 224370	659 bp distal
Tssr99666	transcription start site region 99666	1594 bp upstream
Tssr99667	transcription start site region 99667	1580 bp upstream
Tssr99668	transcription start site region 99668	1568 bp upstream
Usp15	ubiquitin specific peptidase 15	1560 bp upstream