rs45774333 SNP Detail

Summary

• ID
  rs45774333
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  132
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr10:78247666 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                      T TTGGTGTGTC TGAAGATAGC TACAGTGTAC TTACATATAA
  TAATAAATAT ATCTTTGGGT CAGAGCAAGC AGGGACTGAG CGAGCGGGGC CGAATGGAGC
  R
  AGCAGAGGTC CTAAATACAA TTCCCGACAA CCACATGAAG GCTCACAACC TTCTGTACAG
  CTACAGTGTA CTCATATACA TAAAATAAAT AAATCTTTTT T                    
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss146146878	ENSMUSSNP6631578	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	G	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs45774333					SNP	G	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr10:78247666 () rs orientation: forward

Symbol	Name	Function Class
Cpgi1780	CpG island 1780	487 bp proximal
Rr225082	regulatory region 225082	within coordinates
Rrp1	ribosomal RNA processing 1	within coordinates
Tssr3266	transcription start site region 3266	1088 bp downstream
Tssr98302	transcription start site region 98302	1019 bp downstream
Tssr98303	transcription start site region 98303	1117 bp downstream