rs45776145 SNP Detail

Summary

• ID
  rs45776145
• Variation Type
  SNP
• Alleles
  G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:16677747 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TTTCAAAATA AAAAATTTGG
  AATATCTGGG TACAGTGGCT CACACCTATG ATCCCAGCAT TCTGAGGCAG GAGGATTACC
  AGGACTTTGA GGCTAGCCTG GGCTACATAG TGATATCCTG TTTCAAAAAC CAAACCCCAA
  AAGGATCCAG GTGTGCTAGC ATACAACGTC AATCCAGCAT TCAGCAAGCA AAGGCAGAAG
  G
  CAGAGGGCAG AGGGCAGAGG CAGAGGCTGA CAGATCTCTA TGAGTTTGTG GCTAACCTGA
  GCTACACAGT TCTAGGCTAA ACTGGCCTAC AAAGTGAGAT CCCGTTTCAG AAGCAGAATA
  TAGGGACATC CATGAGTGAA GCTGGTCTCC ATGAGTCTGG TACCCACATA CTGAGTACCA
  CACACCCGAA ATGATACCCC                                            
  
  G = G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J
ss148399958	ENSMUSSNP3144124	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	G
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J
rs45776145					SNP	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:16677747 () rs orientation: forward

Symbol	Name	Function Class
Cpgi18406	CpG island 18406	632 bp proximal
Gm71929	predicted gene, 71929	1470 bp downstream
Pnma8b	PNMA family member 8B	860 bp upstream
Rr368243	regulatory region 368243	634 bp upstream
Rr642821	regulatory region 642821	453 bp distal
Rr642822	regulatory region 642822	370 bp proximal
Rr642823	regulatory region 642823	783 bp proximal
Rr642824	regulatory region 642824	1821 bp proximal
Tssr64660	transcription start site region 64660	823 bp upstream
Tssr64661	transcription start site region 64661	1872 bp upstream
Tssr70792	transcription start site region 70792	1827 bp downstream