rs45776236 SNP Detail

Summary

• ID
  rs45776236
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr15:100307515 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CGAGTCCCCA TTTCACATCC
  AGTTCGTCCA CTTTTTACCA ATAAGATGGC CTCTTCTCTC AGTGGGAGTC CTTCCTTTAT
  CTGCTCTCCA TAAGCAACTT GGTCCAAACT GAACCCACCC ACTTCCCACA TAGGAGCAAA
  ACCACACTTG AAAGAGAAGA ACACAGGGGC TAGAGAGATG GCTCAGCGGC TGAGAGCGCC
  R
  ACTGCTCTTC CAGAGGTCCT GAGTTCAATT CCCAGCAACC ACATGGTGAC TCACAACCAT
  CTGTAATGAG ATCTGACGCC CTCTTCTGAA GACAGCTACA GTGTACTTAT TTATAATAAT
  AAATCAATCT TTGGGCTGCA GCGAGTGGGG TTGACTGGAG CAAGCAGAGG TCCTAAATTC
  AATTCCCAAC AAGCAGATGA                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J
ss148475116	ENSMUSSNP1870692	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J
rs45776236					SNP	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr15:100307515 () rs orientation: forward

Symbol	Name	Function Class
Rr509705	regulatory region 509705	976 bp proximal
Slc11a2	solute carrier family 11 (proton-coupled divalent metal ion transporters), member 2	Intron
Tssr136419	transcription start site region 136419	525 bp downstream