rs45778717 SNP Detail

Summary

• ID
  rs45778717
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr10:40505338 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CATTTCACAA GAGAATGGTG
  TTACGTGGTG ATACAGTCAT GGCTAAAGCG AAATCTCTTA TTAGTATATT AACGTGGTTA
  ATATTATTCT ATTAAATATT ATCTGGGCTG GAGAAATGGC TCAGCGATTA ACACATGTAA
  TTGCCAGCAC CTTCATCAGG TGGCGCACCA CCACCTATAA CTCCAGCTCC AGGACATCTG
  R
  TGCCCTCTTC TGGCCTCCAT GGGCACTGCG TGCATGTGAG AACAACATGC AATAGACCAC
  AGACCAACAG ACCACAGCAA TTTAAATGTA AAACAAATCT TTAAGATATA TTATAGCTAT
  TGTGATACAA CCAATTACGT CTCTAGAATC AAATGACTTT CAGGGAGGTT TAATGTGGGC
  TTTTCCTACT ACTGAGCTGT                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	DBA/2J
ss147067355	ENSMUSSNP3293309	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	DBA/2J
rs45778717					SNP	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr10:40505338 () rs orientation: forward

Symbol	Name	Function Class
Ddo	D-aspartate oxidase	669 bp upstream
Rr214674	regulatory region 214674	within coordinates
Rr224698	regulatory region 224698	262 bp proximal
Tssr93026	transcription start site region 93026	645 bp upstream
Tssr93027	transcription start site region 93027	715 bp upstream