rs45783661 SNP Detail

Summary

• ID
  rs45783661
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr11:70059730 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        AGCTTAAGGA GCACAAGGGA CAGTGACTTG AGTGAGATGA
  GAGCAGTGGT GGGGATACTG GTGAAGACAC GGAGGCCCCA TGGTCAGGCA GCTGCTGGCC
  R
  TGTCACCTGT TACTGTGCTT GGGTTCTATG GTCTTATCAC CTCACCCACT CAGCCTCGGT
  TTATGCGTGT GCAATGTTGG GTAACAACAG TGCCTACCT                       
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	DBA/2J
ss132366975	ENSMUSSNP6614367	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	DBA/2J
rs45783661					SNP	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr11:70059730 () rs orientation: forward

Symbol	Name	Function Class
Clec10a	C-type lectin domain family 10, member A	within coordinates
Rr251315	regulatory region 251315	1868 bp distal
Tssr102662	transcription start site region 102662	1706 bp downstream
Tssr102663	transcription start site region 102663	1682 bp downstream