rs45794049 SNP Detail

Summary

• ID
  rs45794049
• Variation Type
  SNP
• Alleles
  T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:126767418 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GCACTAGCAC ATTCTAACAA
  GAAGGCCAGG TACAAGAAGG GACACGGCCC CACCCTCCTA CTACAAGTGC TCTAAGGTGG
  CTTGGAAATA GCATGTCTCC CCAAAGGCTC GTAGGTTGGA TGGTTGGTAG CCATTGGTGA
  ATTCAGTCAC TGAGTTGGTT GGGTCCTGAG TGTGCAAACC CAGTAGATTC ATCTCCATGG
  T
  GGATTCATAA TTTGATAATA TTTTTGGTGG GGGCTGGGTG GAGAAGGCCA CCAGGGACAT
  CTTATTAGGG GTTGCATCTT GTCCCTGGTC TCTTCCCCAT CCCTCCTGTG GCTTGCACCC
  CAGCTAGCAA CTTTGCTATG ATGCTCTGCC TCACCGTAAT CCCACAACAA TGGAGACATG
  CATCCATGAA TTGAAACCTT                                            
  
  T = T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J	MSM/Ms
ss133625928	ENSMUSSNP4714530	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	T	T	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J	MSM/Ms
rs45794049					SNP	T	T	T	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:126767418 () rs orientation: forward

Symbol	Name	Function Class
Gm29788	predicted gene, 29788	1994 bp downstream
Gm67331	predicted gene, 67331	442 bp downstream
Rr638910	regulatory region 638910	1563 bp proximal
Rr638911	regulatory region 638911	1633 bp proximal