rs45795373 SNP Detail

Summary

• ID
  rs45795373
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr8:84327354 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        CGACCTCTGG AAAGAGACTG TGTTTGCCAA GTCTCCTTAC
  CAGGAATTCA CTGACCATCT TGTGAAAATC CACACCAGCC TGCTCAGAGA AACAAAGCTC
  Y
  GGCTGTGGCT ACCAAATAAG GGTTTTTAAT ACATGAAAAA TAAAGTGAAT CAAAGTCTGT
  TTTAAAAAAA AAAATAATGG TTGGGTTATG GTGGAACAG                       
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J	LG/J	SM/J
ss145357763	ENSMUSSNP717795	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	C
ss322745024	CHEV_8_86124624	CHEVERUD	SCREENING_POP	f	SNP			C	T
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J	LG/J	SM/J
rs45795373					SNP	C	C	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr8:84327354 () rs orientation: forward

Symbol	Name	Function Class
Gm18001	predicted gene, 18001	25 bp downstream
Gm42029	predicted gene, 42029	within coordinates