rs45806229 SNP Detail

Summary

• ID
  rs45806229
• Variation Type
  SNP
• Alleles
  G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr1:152917016 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TCTGAAAACT ACTGGTCCCA
  GCAAGGTCCA AAGTTATTTG AAGTTTCAAA GCATCATTGG ACCAAAAACA GCACAAAGTG
  CTGCAGTAAG GAAGCTGTTG CTGGGAGAAG AAGGGATGCA TGCCAACATG GCCCATGGGC
  TTGTTGGCTC AGTAGTGCTA AGTCAACACA TTCCATAATG TGTCATGTTA ACTGAAAGAA
  G
  TCTCCTTCCT GATTCTGTCT CCACTTTTCC ATTAAAAAAA GCTCAGTACA TGTTGGGGAA
  ATGGTGTGGT GCCTGCCACC CCCTCTCCCT CCATCCTGTG AGGGTGGAGA CTGGTCCCAC
  TCTCCCGGCA CCCTGCTTGA CACTGATTAT CCAGTTGCTC TACATCAGAG CTACATCCTC
  TCTCCTCCCT CCAATAAATG                                            
  
  G = G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

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SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J
ss145736613	ENSMUSSNP4951322	ENSEMBL	ENSEMBL_Sanger	f	SNP	G
SNP Consensus Information
SNP					Consensus Type	A/J
rs45806229					SNP	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:152917016 () rs orientation: forward

Symbol	Name	Transcript	Protein	Function Class	Allele	Residue	Codon Position	AA Position
D1Ertd182e	DNA segment, Chr 1, ERATO Doi 182, expressed			1841 bp distal
Nmnat2	nicotinamide nucleotide adenylyltransferase 2			Intron
				Noncoding-Transcript-Variant
Rr420581	regulatory region 420581			455 bp distal
Rr420582	regulatory region 420582			892 bp distal
Rr420583	regulatory region 420583			713 bp distal