rs45806836 SNP Detail

Summary

• ID
  rs45806836
• Variation Type
  SNP
• Alleles
  C

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:136346923 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CCACA AGCCCTTTAT CCACCAGGGC
  C
  GTCTCCATCT CCAGTGCTTA TTGAG                                      
  
  C = C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	LG/J	SM/J
ss147573012	ENSMUSSNP3460385	ENSEMBL	ENSEMBL_Sanger	f	SNP	C
ss321356413	CHEV_4_136175527	CHEVERUD	SCREENING_POP	f	SNP		C	C
SNP Consensus Information
SNP					Consensus Type	A/J	LG/J	SM/J
rs45806836					SNP	C	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:136346923 () rs orientation: forward

Symbol	Name	Function Class
Rr86434	regulatory region 86434	1478 bp proximal
Rr103033	regulatory region 103033	within coordinates
Rr106544	regulatory region 106544	1834 bp proximal
Rr398615	regulatory region 398615	1713 bp upstream