rs45809510 SNP Detail

Summary

• ID
  rs45809510
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:92048778 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CAAGTCTTTA TGCTGGAGTG
  TGGGTGTGAA CACTCACCGA GTACTTAAAT GTCACAGGCT TGACAGCCAG GACAAAGTCA
  CAAGAGAAAA CTCATTTCTG TCTCCATCTT GGTTGCTTGG GGCAACAAGC AGCAGCTCAG
  AGAGAACTGC CCCCTGTGTG CCTGTCCATT GCTTTTACTA AAATAACTGA GGGTTCCAGT
  R
  AGGCTTCTAA ATACACACAC ATTGCTGCTT GCATAGGACA TACTGGTTTT AGCTTCTAAG
  CTACAAGCAA GGGCGGGGGC TACAGCTCAG TTGGTAGGAT GCTTGCCCAG CATGCAGGAA
  GCGTGGGGTT CAGTCCCCAG CTCACATAGC CTCGCTGTGG TGGTGCAGGC CTGTAATTCT
  AGCACTGAAG TGGGAGGAAC                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss60912111	NES16210961	PERLEGEN	MM_PANEL2	f	SNP	A	A	A	A	A	A	A	A	A	A	G	A	A	G	A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs45809510					SNP	A	A	A	A	A	A	A	A	A	A	G	A	A	G	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss60912111	NES16210961	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:92048778 () rs orientation: forward

Symbol	Name	Function Class
Fgd5	FYVE, RhoGEF and PH domain containing 5	within coordinates