rs45812397 SNP Detail

Summary

• ID
  rs45812397
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr11:73132891 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AAACCTGTTG CCAGGAGCCT
  GTGTCCTCCA GACCTAGTCC ACCTCCTTTT TCTTGTGTTT TTCTTAGCAA ATGAACGACA
  ACCATTAGCT CATAAACACG AGAGCATCTC AGAAGTGCAG AGATAAGGAC AGCTCTCCCT
  ATGGAGTCCT TTGGAGTCCT TTTATTTGTG TAAGCAGGAT CACGCTGTGC ACGCTGTAGG
  W
  TATGCAGTTG CTTTCACTCA CTCACGTGTG CTGTAGTTAG CTTTGTATTA GCACGCAGGC
  GTCTGTCTCA CTTAAAAGCT GTTGCCCAGC GTTCACCCAC GGGACTGGCA AGCTATCTGC
  AGTTGCTCAC ACACTGCAGG CCACTGACAC AAGCCTGAGG ATTTTCCCCG TGAAAGTTAT
  GGGAAACTGC AATCTCCAAA                                            
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	MSM/Ms
ss132423091	ENSMUSSNP6581634	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	A
SNP Consensus Information
SNP					Consensus Type	A/J	MSM/Ms
rs45812397					SNP	T	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr11:73132891 () rs orientation: forward

Symbol	Name	Function Class
Trpv1	transient receptor potential cation channel, subfamily V, member 1	within coordinates