rs45814576 SNP Detail

Summary

• ID
  rs45814576
• Variation Type
  SNP
• Alleles
  T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr17:25671249 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        GCTATGAGGC TCCTTCAAGG CCGGAGATGC AGTGCCAGGT
  CCATGAGGGA GGAGCCTCGC CCATGTTCAC CCTGTGCTGG GTTTGAGTCC CTGAACATCA
  T
  ATATTTGTAG AGTTTTTCCA AACTTCCAAG TGGCCCTAAG TAGGGGGCTG CAGTTGGGCC
  CTAGGTCACT CAAGGAACAA GGCGGCTGTG GTAATCCTT                       
  
  T = T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J
ss145389281	ENSMUSSNP5379392	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J
rs45814576					SNP	T	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr17:25671249 () rs orientation: forward

Symbol	Name	Function Class
Gm63608	predicted gene, 63608	within coordinates
Rr523576	regulatory region 523576	239 bp distal
Tssr143159	transcription start site region 143159	1444 bp upstream