rs45816326 SNP Detail

Summary

• ID
  rs45816326
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  132
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr5:92701371 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                      C TTGAAAGTTC CCAGGCACTG TGGCCTGAAT ATTTATGCCT
  TGCCCCCCCT TTTTAGATTT ATTTATTATT ATACATAAGT ATACTGTAGC TGTCTTCAGA
  M
  GCACTAGAAG AGGGCATAGC GTCAGATCTC ATTAAAGGGT GGTTATGACC CATCCTGTGG
  TTTCTGGGAT TTGAACTCAG GACCTTTGGA AGAGCAGTCA G                    
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J	MSM/Ms
ss148834722	ENSMUSSNP6255043	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	C	C	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J	MSM/Ms
rs45816326					SNP	C	C	C	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr5:92701371 () rs orientation: forward

Symbol	Name	Function Class
Fam47e	family with sequence similarity 47, member E	1557 bp upstream
Tssr47317	transcription start site region 47317	1523 bp upstream