rs45823249 SNP Detail

Summary

• ID
  rs45823249
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  132
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr10:21067844 (GRCm39)
• SNP Orientation to the Genome
  reverse

• SNP Reference Flanking Sequence

                      A GACCAACAGT GTCAACCCAC CGGGATCCCT CAGAGCTCCC
  AGAGACTAAA GCCACCAACC AAAGAGAGGG CATGGGCTGG TCCATGGCCC TGACACATAC
  R
  TAGCAGAGGT CCTCCTTGTC TGGACTCAGT AGGAGAGGAT GTGCCCAGTC CTGTAGAGAC
  TTGATGCCCC CATGGAAGGG GGATGCTGGA GGGTGGTGAG G                    
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	DBA/2J
ss147602250	ENSMUSSNP2266561	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	DBA/2J
rs45823249					SNP	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr10:21067844 () rs orientation: reverse

Symbol	Name	Function Class
Rr428670	regulatory region 428670	600 bp proximal
Tssr92624	transcription start site region 92624	229 bp upstream