rs45826591 SNP Detail

Summary

• ID
  rs45826591
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:121743558 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ACCAAAGAGT TCAGGAAGTT
  CTCTGGAAGT TCTGGGCTAA GGGAAACACA CCACAAAACA AGCCTCAACG TAATCCCTTG
  CTTTTATATC TAGTGGGAAA TTAACAGTCG CACACATGGC TCGATTCCAT TGAGCAACAT
  CCCTGGAGTC TGAGCTGGTA GGATTTGGAG TAAGGGCATC GAGTAAGGCA GGCTGGATGG
  R
  TTGAGGCAGC ATTTGCAAGA TGCCATCTGA CTCACGGGAG CTGGTCTGCC CTCCAGGATG
  AGTCAAGTGT GGGTGAGCCA TCAGTTGTAA ACTGAGCTGA CCACATGTGT TCCTCCTGAG
  AGGAGGGTCA GGCAGAGACC GCTGGAGGGA TGGCGTCTTA TGGGGAGCAT GACAGATCTC
  TGAGAGCTGG GGAGAGGAAG                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	CAST/EiJ	FVB/NJ	KK/HlJ	NOD/ShiLtJ	PWD/PhJ
ss61238805	NES16858685	PERLEGEN	MM_PANEL2	f	SNP	G	A	G	G	G	G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	CAST/EiJ	FVB/NJ	KK/HlJ	NOD/ShiLtJ	PWD/PhJ
rs45826591					SNP	G	A	G	G	G	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss61238805	NES16858685	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:121743558 () rs orientation: forward

Symbol	Name	Function Class
Cyp8b1	cytochrome P450, family 8, subfamily b, polypeptide 1	within coordinates
Rr689114	regulatory region 689114	1803 bp proximal
Tssr92081	transcription start site region 92081	188 bp downstream
Tssr92082	transcription start site region 92082	327 bp downstream
Tssr92083	transcription start site region 92083	683 bp downstream
Tssr92084	transcription start site region 92084	1796 bp downstream