rs45830781 SNP Detail

Summary

• ID
  rs45830781
• Variation Type
  SNP
• Alleles
  G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:156193992 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TTTTT TTTTGAGACA GGGTTTCTCT
  G
  TATAGCCCTG GCACTCACTT TGTAG                                      
  
  G = G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J
ss148126449	ENSMUSSNP5822362	ENSEMBL	ENSEMBL_Sanger	f	SNP	G
SNP Consensus Information
SNP					Consensus Type	A/J
rs45830781					SNP	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:156193992 () rs orientation: forward

Symbol	Name	Function Class
9430015G10Rik	RIKEN cDNA 9430015G10 gene	463 bp upstream
Cpgi15500	CpG island 15500	94 bp proximal
Gm69135	predicted gene, 69135	within coordinates
Rr398931	regulatory region 398931	205 bp upstream
Rr606676	regulatory region 606676	within coordinates
Rr606677	regulatory region 606677	473 bp distal
Rr606678	regulatory region 606678	386 bp distal
Rr606679	regulatory region 606679	193 bp proximal
Rr606680	regulatory region 606680	355 bp proximal
Rr606681	regulatory region 606681	475 bp proximal
Tssr40790	transcription start site region 40790	436 bp upstream
Tssr40791	transcription start site region 40791	478 bp upstream