rs45831134 SNP Detail

Summary

• ID
  rs45831134
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr17:23734073 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AAAATCCCCG TGTCCATGTG
  CTCAAGGTTC TTCCCCACTT TCTTTTCTAT TAGTTTCAGT ATATCTGGTT TTATGTGGAG
  GTCCTTGATC CACTTGGACT TGAGCTTTGT ATAAGTAGAT AAGAATGGAT CAATTTGCAA
  ACTAAATAAA TATCTTTGTA AAGAGTCTCA CAAAAGGTAT GCTCCAAGTT GAGGGGAAGT
  R
  TGGCAAGACA TGAAGAAAAG AGCATATACT GGAGACAGTA CAAGCTATGA CAAAGTCAAC
  AAGGAAAAAT CAAACTCATT GGTGAACAAG AAAATATGAT TAAAATTTCA AATTTAAAGG
  GAGTGGGTGG GAACAAGACA AAGAAGAACC CACTCTAGCT ATCAACAGTA TATTCATTGT
  ATTGTAGCTG TACATATCTA                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss60551048	NES16565882	PERLEGEN	MM_PANEL2	f	SNP	G	G	G	G	G	G	A	G	G	G	A	G	G	A	G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs45831134					SNP	G	G	G	G	G	G	A	G	G	G	A	G	G	A	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss60551048	NES16565882	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr17:23734073 () rs orientation: forward

Symbol	Name	Function Class
Gm7898	predicted gene 7898	355 bp upstream
Rr329666	regulatory region 329666	328 bp proximal