rs45831596 SNP Detail

Summary

• ID
  rs45831596
• Variation Type
  SNP
• Alleles
  G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr5:32572351 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GATAGTGACC TCTGTCTGAA
  TCTTTCACTG GGACACTCCC GAAGGCCAGA CTGTCATTAA GTCTGCAGAG TAAACCCCAC
  CCTAAGCAGA AGCCAAACTA GGAGTCGCAG TCATCCCTGC CATAAAGGGA AGGCTCTAGG
  AACTGCACAA GTTCACCAGA GCCTGCATTC AAATGTGCAA GCTAATAGGA GACCCTCAAG
  G
  CTCTGCCCAG ACTCCTGGGG CTCTGGGCAG CTTCAGAAGT ATGTTTCACT GGCTGGTTCA
  GGTTTCTCTG GGAAAGAAAC AGACACAAAG AACGGAGGGA CCTGTTTAGG GGAACTACCA
  AGAAGAGCCC TACCCCCCCA CCCCACCCCT GCCCTGAAGT TATAGGCAGG ATGTGCATAT
  TCAGGAAATC TCACTAAGTT                                            
  
  G = G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J
ss148200750	ENSMUSSNP789522	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J
rs45831596					SNP	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr5:32572351 () rs orientation: forward

Symbol	Name	Function Class
Rr609355	regulatory region 609355	1475 bp distal
Rr609356	regulatory region 609356	1085 bp distal
Rr609357	regulatory region 609357	58 bp distal
Rr609358	regulatory region 609358	1625 bp proximal