rs45832831 SNP Detail

Summary

• ID
  rs45832831
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr11:35934693 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GTCTTGCACA GTGCTCAGCA
  GCAGAGATCG ACCAGGCAAG GACTGTGTTG AGTGTATTCT CTGGAACGGG AGCAGGACTT
  GAAGTCTGGT CCTGCGTAGT TCCAGGACTT CTGTTCTGGG CAGGCTGCTG CTGGCCACTC
  GTCTGAGAGG AGGAAATAGA GTTTCCACTC TGGGGGAAGT GGAGGGGAGG GCACGGGAAA
  R
  CATCTCCCAG GCTGTGTGGG GAAAGCATGC TCCCTAGCTT GCAGACTGAC TTTCGGAGGA
  GGGGGGGAGG GGGTGCAGCT GCTTGTTTCC CCCACAACAG ATATGCAGAT TCAGCTCTCT
  CTATAGGAAC CTCTGGACTA TCCCTTTGGA CTGAGAGCAG TGATAACCAG CAATGAGGTC
  TCTGTTTTAC CTCAACAGAC                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	LG/J	SM/J
ss131955172	ENSMUSSNP4970560	ENSEMBL	ENSEMBL_Sanger	f	SNP	A
ss323639192	CHEV_11_35857368	CHEVERUD	SCREENING_POP	f	SNP		G	A
SNP Consensus Information
SNP					Consensus Type	A/J	LG/J	SM/J
rs45832831					SNP	A	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr11:35934693 () rs orientation: forward

Symbol	Name	Function Class
D11Mit108	DNA segment, Chr 11, Massachusetts Institute of Technology 108	1937 bp distal
Rr233594	regulatory region 233594	1708 bp proximal
Tenm2	teneurin transmembrane protein 2	within coordinates