rs45834345 SNP Detail

Summary

• ID
  rs45834345
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:121506595 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        AAGCTGAATT CACCTTGGGA GAGAATAGGA AAATGGAATA
  AAACGAAGAA AGGAATTTAA TTTTTTTCCG GTCTACCACA GGCTGTGAAT AAATGGTCTC
  K
  ACAGGATTTC TGGAAGCCGT TCCATTTTTG GTTTTGTTGT TGTTGTTGTT GTTGTTGTTG
  TTGTATGTTG TTGTTTGTGT GACAAAGGCG CGTTTACTA                       
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J	LG/J	MSM/Ms	SM/J
ss135727269	ENSMUSSNP6454989	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	T	G		G
ss320905049	CHEV_3_121415864	CHEVERUD	SCREENING_POP	f	SNP				T		G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J	LG/J	MSM/Ms	SM/J
rs45834345					SNP	T	T	G	T	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:121506595 () rs orientation: forward

Symbol	Name	Function Class
Gm43607	predicted gene 43607	500 bp upstream
Rr584146	regulatory region 584146	202 bp proximal