rs45844677 SNP Detail

Summary

• ID
  rs45844677
• Variation Type
  SNP
• Alleles
  T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr13:97553281 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        ATTGC CCTCTCCTGG TGTCTGAAGA
  T
  ATCTACAGTG TACTCACATA TATAA                                      
  
  T = T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
ss145035308	ENSMUSSNP3221581	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	T	T
ss324496782	CHEV_13_98186728	CHEVERUD	SCREENING_POP	f	SNP				T	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
rs45844677					SNP	T	T	T	T	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr13:97553281 () rs orientation: forward

Symbol	Name	Function Class
Rr274314	regulatory region 274314	481 bp distal
Rr277788	regulatory region 277788	520 bp proximal
Rr285518	regulatory region 285518	482 bp distal