rs45847950 SNP Detail

Summary

• ID
  rs45847950
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:152063603 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GAAAC TGGGTCTGGA TCCTTAGCAC
  R
  CATGCAAATG CATTTGCAAG GGATA                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
ss145726064	ENSMUSSNP4576133	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	A	A
ss320062918	CHEV_1_154034982	CHEVERUD	SCREENING_POP	f	SNP				A	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
rs45847950					SNP	A	A	A	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:152063603 () rs orientation: forward

Symbol	Name	Function Class
Gm53608	predicted gene, 53608	within coordinates
Rr420427	regulatory region 420427	1085 bp distal