rs45851903 SNP Detail

Summary

• ID
  rs45851903
• Variation Type
  SNP
• Alleles
  G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr8:34923255 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        TCTACACGTG AATATATATG TATGTATAAA GCAACTCATA
  TATTTGTGCG TTTGAAAAGG TTTATTTATT GATGTGTTCT ATGTATGAGT ATTTGCCTCC
  G
  TGTATGTGTC TGCACCATGT GTATACAATG GTCACAAAGG ACAGAAGAGG GAGTAAGACC
  CTCCCACAAC TGGAGTTACA AATGTATTGA GCTGCTGTG                       
  
  G = G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J
ss149109305	ENSMUSSNP1956657	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J
rs45851903					SNP	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr8:34923255 () rs orientation: forward

Symbol	Name	Function Class
Cpgi20247	CpG island 20247	399 bp distal
Gm39159	predicted gene, 39159	265 bp downstream
Gm45349	predicted gene 45349	within coordinates
Gm46038	predicted gene, 46038	817 bp upstream
Rr400818	regulatory region 400818	472 bp downstream
Rr662016	regulatory region 662016	316 bp distal