rs45857616 SNP Detail

Summary

• ID
  rs45857616
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr10:13434844 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CAAATACCTT AGGTGTTCTG
  AGCCTCGTCC AAGCAGAATG GCTGATGTAA GCGTGTCTTT TACCAGTCTT ACTGCTTATA
  TGCACTTGAG GATGGGGGGG ACACCTAGTA TATCCAGTTA TTTTCAGGGA CTTCCTGAAG
  CCTTTGAGTT GTTTACTTCC TGAGTTTAAA GAACTTTTCT GCAAGATGGA GCATTTCATG
  Y
  CAACCTAAAA CATCCTGTGT CTTAAGAATC TCACATCCAA GGTAGAAAAT TATGTGCACG
  TACGCGCATG CGTGAGTGTG CCTGTGTGTG ACTGCATGCC TCTAGATGCC TTCAGAGGCA
  AGAGAAGGAT GTTGGAGCTC CTGGAACTGT TCACTGGCGC TTCAGGCACT TGTGGACCGC
  CCAGTATGGG TGATCAAAAC                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	BALB/cByJ	CAST/EiJ	DBA/2J	MOLF/EiJ	PWD/PhJ
ss52145435	NES15236927	PERLEGEN	MM_PANEL2	f	SNP	T	T	C	T	T	T
SNP Consensus Information
SNP					Consensus Type	A/J	BALB/cByJ	CAST/EiJ	DBA/2J	MOLF/EiJ	PWD/PhJ
rs45857616					SNP	T	T	C	T	T	T

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss52145435	NES15236927	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr10:13434844 () rs orientation: forward

Symbol	Name	Function Class
Adat2	adenosine deaminase, tRNA-specific 2	within coordinates
Gm66583	predicted gene, 66583	1986 bp downstream