rs45859685 SNP Detail

Summary

• ID
  rs45859685
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr10:37905528 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TCTCAGGTCG GGCGGACCCC
  TGTGCTCTCA CCAGGAAGGT GGCCAGTTGT CTGGAGCTGA AGATGGCGCC GCCTCAGAAA
  AGAATTGTTC TTGAGAAGGA GCAGATATCA TTTAAATCAG CACTTCCCTG CATGCTTTCT
  CTATATCTAA AACTATTTTA ATTGTTAAAA TTCTGGCCAC AATTCCTATC TAATAAATTC
  R
  TCACTACCTT GAAATTAACA GTTAAAAACT TTCTAGAACT GAACGTACTT TTTGACATAA
  ACATTAATTT TTATTATTTT GTCACTGACT TTTAAATTCA TTCCGATTTA TGAGTAAGCA
  TTGATATACT TTATTGTACA TTGTATATTA GAGATTTCTA TTTTATTTTT GTATTAAAAT
  ACATTCTATT CCTCACATAA                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	NOD/ShiLtJ	NZW/LacJ	WSB/EiJ
ss61270712	NES16888722	PERLEGEN	MM_PANEL2	f	SNP	G	G	G	G	G	G	G	G	G	G	G	A	G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	NOD/ShiLtJ	NZW/LacJ	WSB/EiJ
rs45859685					SNP	G	G	G	G	G	G	G	G	G	G	G	A	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss61270712	NES16888722	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr10:37905528 () rs orientation: forward

Symbol	Name	Function Class
Gm67610	predicted gene, 67610	within coordinates
Gm67614	predicted gene, 67614	within coordinates