rs45861297 SNP Detail

Summary

• ID
  rs45861297
• Variation Type
  SNP
• Alleles
  G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:126559660 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ATTTTGTCCC TGCAATTCTT
  TTAGATAGGG ACAATTCTGC ATCAGGGTTT TTGACTGTGG GATGGCAACC CCATTCCTCA
  CTTGATGCCC TGTCTTTTTG CTGGAGGTAG ACTGTACCCG AGTTCCCCCT CCCCACTGTT
  AGGCATTTCA TCTAAGGTCC CTTTGAGTCC TGAGAGTTTC TCACCTCCCA GGTCTCTGGT
  G
  CATTCTGAAG CACCCCCCCC TCCCCCACCC CACCCCACCC CTCCCACTCC TCATATTTCC
  ATTCATTCTG CTGGTCATCA GAGTCCTCTC CTTCTGTGTC ATCTGTACTC CCCCACCCCC
  AGCTGATCAT GTTCCCCTTT TCCCTTCTCC CTCACCCCTC TCCCACCCAG GTCCCTCTCT
  CCCTCTGCCT CTTGTGGTTG                                            
  
  G = G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	DBA/2J
ss147510270	ENSMUSSNP1563031	ENSEMBL	ENSEMBL_Sanger	f	SNP	G
SNP Consensus Information
SNP					Consensus Type	DBA/2J
rs45861297					SNP	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:126559660 () rs orientation: forward

Symbol	Name	Function Class
Tssr19969	transcription start site region 19969	301 bp upstream
Usp8	ubiquitin specific peptidase 8	within coordinates