rs45863065 SNP Detail

Summary

• ID
  rs45863065
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:78357753 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    TGTGAAgtg tgtgtgtgtg tgtgtgtgtg
  tActttacac acataggtat gagggatgga attcaggcca tcaagtttgg caaagcacct
  ttatccactg agccatctcA ACCAGGGTCC CCACCCCAAC ACACACTGTC TAGAAAAAAA
  M
  CAAAAAAAAA AAAAAACCCA TGTGAGGCAG ATTTCACTAC ATCACCCACC CCTACTTTCT
  tgtcttactt aaggttagta ttgctgtgat gtaatgccat gacgaaaggc aggctgggga
  ggaaagggtt gatttggctt agtatcctga                                 
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
ss136667726	ENSMUSSNP2297635	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	C	C
ss323016290	CHEV_9_78298278	CHEVERUD	SCREENING_POP	f	SNP				C	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
rs45863065					SNP	A	C	C	C	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:78357753 () rs orientation: forward

Symbol	Name	Function Class
Cpgi22068	CpG island 22068	1547 bp distal
Gm17324	predicted gene, 17324	1685 bp upstream
Mto1	mitochondrial tRNA translation optimization 1	within coordinates
Rr683555	regulatory region 683555	1195 bp distal