rs45868463 SNP Detail

Summary

• ID
  rs45868463
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr19:59375985 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        AGCCA GTATCTATAT CTTGCAACCC
  W
  AAGCATCCTA GAGCACATGG TTCTG                                      
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J	LG/J	MSM/Ms	SM/J
ss146571933	ENSMUSSNP2152975	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	A	T		A
ss325874040	CHEV_19_59462043	CHEVERUD	SCREENING_POP	f	SNP				T		T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J	LG/J	MSM/Ms	SM/J
rs45868463					SNP	A	A	T	T	A	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr19:59375985 () rs orientation: forward

Symbol	Name	Function Class
Gm33756	predicted gene, 33756	1910 bp upstream
Rr370546	regulatory region 370546	1670 bp upstream
Rr550620	regulatory region 550620	74 bp distal
Rr550621	regulatory region 550621	198 bp distal
Rr550622	regulatory region 550622	168 bp distal
Rr550623	regulatory region 550623	1123 bp proximal
Rr550624	regulatory region 550624	1424 bp proximal
Rr550625	regulatory region 550625	1837 bp proximal