rs45872487 SNP Detail

Summary

• ID
  rs45872487
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:30401398 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TATAAGTATG AAAACAGACC
  TCATTCTTTT TGCTGCCAGA CTGCTACCAG CAGTCTCATG GCTGCTTCCA GAAAAGATCT
  GTTCCACTCA GTGCTGCCCT ACTGATGTAA CAAAAGCCCC ACCTGGCTAA AGTTGACATC
  TGAAGAAGTA GATTTACAAA CTGGTCAAGA AAGGGACTCC TTCCCAAATA GGTGTGATCC
  Y
  GAGGGACTCA CATGGTGTGC CACAGGTTGT TTAGTGACGG GCAATAAAAC CAAGGCTTTG
  TCCCTATCTC CCTGAGGAGC TCTGCCATTT GATTTAAAAA GCAGTAGCTG TCTGCAAGCA
  CCTTGAGAGG AGCAAAAAGG AGAAGGGTGC TGAATTCCAT CTGGTTCTGA CAGAGAGCAG
  AATTCATCGA CTGACTCCTC                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J	MSM/Ms
ss136239990	ENSMUSSNP4161095	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	T	T	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J	MSM/Ms
rs45872487					SNP	T	T	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:30401398 () rs orientation: forward

Symbol	Name	Function Class
Gm47714	predicted gene, 47714	within coordinates