rs45875725 SNP Detail

Summary

• ID
  rs45875725
• Variation Type
  SNP
• Alleles
  C

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:101128484 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GTGTTAGAGA AAATGTGGCT
  TTGTTGGAGA TGGTGTAGCC TTTTTGGAGG AAGTGTGTTT CTAGGATTGG GCTTTGGGGT
  TTCCAAAGCC CATACCAGAC CAAGGCAATC TTCGTTGATC TTTGTCATCT AGCTGCATGT
  GATGGATGTA TCTCTTAGCC CCTGCTCCAG CTCCATGTGT ACCACCGTGC TCCCTGCCAG
  C
  ATGATGATGG ACTAAACCTC TGAAGATGTA AGCAAACCCC ATAAGAGTTG CCATGTCATG
  GTGTCTCTCT ACAGTCATGG AAATGAAAAG GCATGGATTT AATAAAGTGT GGGGCTGTCT
  GCCCTTGGAG GAAGGTTAGG AACTCAGACT TGACAGCTGA GGTCTTGATC ATTTTCCGGG
  GGATCCATCT CCACCCAGGA                                            
  
  C = C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J
ss135545503	ENSMUSSNP1772763	ENSEMBL	ENSEMBL_Sanger	f	SNP	C
SNP Consensus Information
SNP					Consensus Type	A/J
rs45875725					SNP	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:101128484 () rs orientation: forward

Symbol	Name	Function Class
Gm65590	predicted gene, 65590	within coordinates
Rr581978	regulatory region 581978	1070 bp distal