TAAGTAACTG CTTCACAGGC TTGCCTACAG CCCAATCTTA TGGAAGTGTT TTCTCAACTG AGGTTCTCTC CGGCTTGTGT GAAGTTGAAA TAGAAACTAG GCAGCGCAAA TCCTCGGTGT ACTTAACAGC CAACAAGCCA CTCTGCTTGT TAATAGTCAC ATTTCCCCTG AGCATCAGAC TCTGGAGATG AAATGTTTCA R GATGTCATCA GTAAGATTGC TTCGGTTCAG AGACCTTAGC TGGCTATTGT TGCTCACGCC TGTAGTTTCA ATGCTTGGGA GACTGAGGCA AGAGAATCTC CAAGACTTTG AGGCAAGGGA GAGCCACAAA GTGAGTTCTA GGCTACCCTG GGCTGCAGAG TGCCACCCTG TTTCAAAAAC TAAAATTAAC TAATTAATTA R = A/G Note: Sequence in lower case indicates low-complexity or repetitive sequence |
Assay ID | Submitter SNP ID |
Submitter Handle |
Population | ss orientation |
Variation Type | 129S1/SvImJ |
A/J |
AKR/J |
BALB/cByJ |
BTBR T<+> Itpr3 |
C3H/HeJ |
DBA/2J |
FVB/NJ |
KK/HlJ |
MOLF/EiJ |
NOD/ShiLtJ |
NZW/LacJ |
PWD/PhJ |
WSB/EiJ |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
ss60330234 | NES15828215 | PERLEGEN | MM_PANEL2 | f | SNP | A | A | A | A | G | A | A | A | A | G | A | G | A | A |
SNP Consensus Information | |||||||||||||||||||
SNP | Consensus Type | 129S1/SvImJ |
A/J |
AKR/J |
BALB/cByJ |
BTBR T<+> Itpr3 |
C3H/HeJ |
DBA/2J |
FVB/NJ |
KK/HlJ |
MOLF/EiJ |
NOD/ShiLtJ |
NZW/LacJ |
PWD/PhJ |
WSB/EiJ |
||||
rs45879653 | SNP | A | A | A | A | G | A | A | A | A | G | A | G | A | A |
Assay ID | Submitter SNP ID |
Submitter Handle |
Population | ss orientation |
Variation Type |
Alleles |
---|---|---|---|---|---|---|
ss60330234 | NES15828215 | PERLEGEN | MM_PANEL | f | SNP | A/G |
Location: Chr1:156056746 () rs orientation: forward | ||||||||
Symbol | Name | Transcript | Protein | Function Class |
Allele | Residue | Codon Position |
AA Position |
---|---|---|---|---|---|---|---|---|
Gm38113 | predicted gene, 38113 | 1883 bp upstream | ||||||
Rr421145 | regulatory region 421145 | 1940 bp distal | ||||||
Rr421146 | regulatory region 421146 | 157 bp proximal | ||||||
Rr421147 | regulatory region 421147 | 295 bp proximal | ||||||
Rr421148 | regulatory region 421148 | 443 bp proximal | ||||||
Rr421149 | regulatory region 421149 | 563 bp proximal | ||||||
Rr421150 | regulatory region 421150 | 1461 bp proximal |
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO) |
||
Citing These Resources Funding Information Warranty Disclaimer, Privacy Notice, Licensing, & Copyright Send questions and comments to User Support. |
last database update 03/25/2025 MGI 6.24 |
![]() |
|