rs45881614 SNP Detail

Summary

• ID
  rs45881614
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr10:111274017 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CACACCTATT CCAACAAGGC
  CACACCTCCA AATGGTGCCA CTCCCTGATC CAAGAATATA CAAACCATCA CACTGCCACA
  GAAGTCAGCA GGAATCACAG TCTAGGCAAA GAAGGAAGCA GGCTCGGCTC CCTAAAGGCA
  AGACTTTGAG TAGAAGAAAA ATATATAAAT AATTGAATTA TCTGCATTTT GAGTATGATA
  S
  TGCCGGATGA GAATCTTTGT AGTACTGCCA TTTCTGGGCT GGTATAGCTA TAAATAGAGC
  AATTCTTTTC AAACCACCTC CAAAGGTACA CTTTCTTCAG ATTAAAAAGT ATTTACTTAA
  ATTAGGCAAG AAACCAGAAC TAAGCCTAGA AAATTATTTC AGTACTGACT AATGTCACCA
  CTTTATTTTT AACCTATATG                                            
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss61316219	NES16925815	PERLEGEN	MM_PANEL2	f	SNP	C	C	C	C	C	C	C	C	C	C	G	C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs45881614					SNP	C	C	C	C	C	C	C	C	C	C	G	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss61316219	NES16925815	PERLEGEN	MM_PANEL	f	SNP	C/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr10:111274017 () rs orientation: forward

Symbol	Name	Function Class
Rr229875	regulatory region 229875	1274 bp proximal