rs45883657 SNP Detail

Summary

• ID
  rs45883657
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  132
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:136327392 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                      T ATGAAAAAAG CAGAATGTCT ACATTTTCTG CAAGCAAGGA
  TCTGAAAATG AATAATATAT TCATAAAGTT ATTCTAATGC CCCATTGTTA TAAACATGTA
  M
  TAAGTACATC TCCTAACTTC ATTTTAAAAG AAGATAATAA TCTACAACTC TCAGGGTAAC
  ATAATATATA AGTGCGTAAT AAAACATATA TGTATATATT A                    
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	DBA/2J
ss147649285	ENSMUSSNP1232092	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	DBA/2J
rs45883657					SNP	A	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:136327392 () rs orientation: forward

Symbol	Name	Function Class
Gm32546	predicted gene, 32546	within coordinates
Rr565839	regulatory region 565839	142 bp proximal
Rr565840	regulatory region 565840	434 bp proximal
Rr565841	regulatory region 565841	459 bp proximal