rs45891028 SNP Detail

Summary

• ID
  rs45891028
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr15:97966361 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TTGGC AGCTTGATTT TTCCCTTCTG
  R
  GTGATATGAG GATGAGCCTC CAAGA                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	DBA/2J	LG/J	SM/J
ss148449716	ENSMUSSNP534368	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	A
ss325078466	CHEV_15_97898911	CHEVERUD	SCREENING_POP	f	SNP			G	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	DBA/2J	LG/J	SM/J
rs45891028					SNP	G	A	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr15:97966361 () rs orientation: forward

Symbol	Name	Function Class
Gm25668	predicted gene, 25668	1274 bp upstream
Rr305744	regulatory region 305744	1240 bp proximal
Rr315538	regulatory region 315538	40 bp proximal
Rr315539	regulatory region 315539	1840 bp proximal
Rr316424	regulatory region 316424	1312 bp distal
Rr370004	regulatory region 370004	763 bp downstream
Senp1	SUMO1/sentrin specific peptidase 1	within coordinates